Signature	SharedGeneNum	SharedGenes	AvgPval	BreastC_M12 Chr3p_UniqueNum	BreastC_M12 Chr3p_pVal	BreastC_M12 Chr3p_Unique	ColonC_M4 CellCycle SMARCA2-Correlated_UniqueNum	ColonC_M4 CellCycle SMARCA2-Correlated_pVal	ColonC_M4 CellCycle SMARCA2-Correlated_Unique
GCCATNTTG_YY1_Q6	2	HNRNPA1|SP1	1.00702731029e-06	31	1.77672344636e-06	ACTR8|AKAP8|AKAP8L|CCDC71|CLK4|DDX6|DDX17|DYNC1H1|FAM193B|KIAA1143|KPNA6|MAP3K4|METTL3|POU2F1|PPP4R2|PUM1|RBM5|RBM39|RFX1|RUFY3|SFPQ|SHANK2|SRSF5|SYNE2|TARDBP|TP53BP1|TSC1|TTC17|WASL|ZBTB40|ZNF638	52	2.37331174226e-07	ADK|ADO|AEBP2|ARF1|ATE1|ATF1|C16ORF72|CCDC6|CCND2|CDK17|EIF2B4|EIF4G2|EMG1|EXOC6|EZR|FOXN2|GIGYF2|HNRNPH3|IWS1|KANSL2|KIF15|KNTC1|LMNB1|MRPL51|MYNN|NCAPD2|NDC80|NDUFS1|NFYA|NUDT3|PCNT|PDSS2|PHB2|PNRC2|PPP1CC|PPP2CA|PRRC1|R3HDM1|RAB1A|RAB10|RACGAP1|RIF1|SERBP1|SFXN1|SRSF3|TAF15|TIAL1|TMEM69|TRA2B|UGGT1|ZBTB11|ZNF143
GCM_DDX5	1	HNRNPA1	0.000130095838347	8	0.000181689431719	HNRNPL|HNRNPM|HNRNPU|PSMD6|SF1|SMARCC1|SRSF4|SRSF5	12	7.85022449754e-05	CAPRIN1|DDX18|DHX9|DYRK1A|EIF4G2|HMGN1|NAP1L1|NCL|PTGES3|SLC25A3|TRA2B|YWHAQ
GNF2_HDAC1	0		1.96232359965e-05	14	1.05213409294e-05	FAM111A|HNRNPA3|HNRNPDL|HNRNPM|HNRNPU|RBBP6|RBM39|SF1|SNRNP200|SRRM1|SRSF4|SS18L2|TARDBP|YTHDC1	19	2.87251310636e-05	CCDC59|CDC40|DDX18|DDX47|EIF2B1|EIF4B|HNRNPF|HNRNPR|MCM3AP|PNRC2|POP5|RPL22|SART3|SCAF11|SRSF3|SRSF10|TIAL1|TRA2B|ZC3H15
GSE15215_CD2_POS_VS_NEG_PDC_DN	1	ZDHHC17	0.000521372245246	15	0.000990948152769	ARIH2|CEP135|DCP1A|EFCAB14|GOLGA4|GORASP1|LMBR1L|MTF1|MYH3|PARP6|PRKCD|PSMD6|RHOA|SHQ1|ZFC3H1	27	5.17963377235e-05	ARHGAP19|BRWD1|C2CD2|C6ORF120|C21ORF91|CDC123|CDYL|CSTF3|FAM98A|GABPA|GLUD2|KIF24|MAPK14|MAPKAPK5-AS1|MFF|NCK1|NELL1|ODC1|PCNT|PTEN|RAP1B|SDHAF3|SELENOT|SRSF10|TFB1M|UGP2|USP39
Human Bladder_Osman06_346genes_BladderVsTesticularVsKidney (16740760-TableS2b)	2	GNB1|INPP5A	2.03407809477e-06	26	1.03225923176e-07	ARID1A|ARPC4-TTLL3|CCDC84|CYB561D1|ENGASE|GBE1|GRIPAP1|HERC2P9|KPNA6|MGEA5|NISCH|OFD1|PHF1|PUM1|RBM4|RBM33|SCAP|SIK3|SMARCC2|SNRNP200|SRSF4|SRSF6|TMEM63A|TP73-AS1|ZNF638|ZNF641	36	3.96493026637e-06	ABRAXAS2|ACBD5|ACTR6|AGPS|ARF1|ATG5|C21ORF33|CSTF2T|DCUN1D1|EIF5B|ENPP4|FOXN2|FXR1|GART|GLUD1|GLUD2|HMGN4|HSP90B1|HSPA13|MRPS10|NDUFS1|NRIP1|PPTC7|PSME4|PTP4A2|RAB10|RSF1|SEPT2|SMC3|STRN|TAF15|TMPO|USP1|VTA1|WDR33|YEATS4
Human Bladder_Osman06_346genes_CancerVsControl (16740760-TableS2a)	2	GNB1|INPP5A	2.03407809477e-06	26	1.03225923176e-07	ARID1A|ARPC4-TTLL3|CCDC84|CYB561D1|ENGASE|GBE1|GRIPAP1|HERC2P9|KPNA6|MGEA5|NISCH|OFD1|PHF1|PUM1|RBM4|RBM33|SCAP|SIK3|SMARCC2|SNRNP200|SRSF4|SRSF6|TMEM63A|TP73-AS1|ZNF638|ZNF641	36	3.96493026637e-06	ABRAXAS2|ACBD5|ACTR6|AGPS|ARF1|ATG5|C21ORF33|CSTF2T|DCUN1D1|EIF5B|ENPP4|FOXN2|FXR1|GART|GLUD1|GLUD2|HMGN4|HSP90B1|HSPA13|MRPS10|NDUFS1|NRIP1|PPTC7|PSME4|PTP4A2|RAB10|RSF1|SEPT2|SMC3|STRN|TAF15|TMPO|USP1|VTA1|WDR33|YEATS4
Human Bladder_Osman06_1054genes (16740760-TableS1)	3	GNB1|INPP5A|USP47	2.64322380307e-05	45	1.9814676334e-05	APPL1|ARID1A|ARIH2|ARPC4-TTLL3|AVIL|C3ORF62|CBX6|CCDC84|CYB561D1|ENGASE|GBE1|GRIPAP1|HERC2P9|HNRNPL|HNRNPM|IDS|KPNA6|MGEA5|NISCH|NOL9|OFD1|OGT|PHF1|PLA2G4B|PUM1|RBM4|RBM33|RERE|SCAP|SFI1|SIK3|SMARCC1|SMARCC2|SNRNP200|SRSF4|SRSF6|SS18L2|TMEM63A|TP73-AS1|TTC17|VAMP1|YLPM1|ZNF638|ZNF641|ZNF767P	75	3.30497997275e-05	ABRAXAS2|ACBD5|ACTR3|ACTR6|AGPS|ARF1|ATG5|ATL2|C21ORF33|CCDC125|CDC123|CSTF2T|CSTF3|DCUN1D1|DHFR|EIF5B|ENPP4|FOXN2|FXR1|GART|GLUD1|GLUD2|HCG27|HIF1AN|HMGN4|HSP90B1|HSPA13|KCMF1|MAPK14|MFF|MRPS6|MRPS10|MS4A3|NCOA4|NDUFS1|NFYA|NMD3|NNT|NRIP1|NUDT5|PPHLN1|PPIF|PPP2CA|PPTC7|PRDX3|PREP|PRMT2|PRPF40A|PSME4|PTCD3|PTP4A2|QRSL1|RAB10|RECQL|RIF1|RPL22|RPLP0|RSF1|SART3|SCAF11|SENP1|SEPT2|SMC3|STRN|TAF15|TBP|TMPO|TRAK2|TYMS|UBXN4|USP1|USP16|VTA1|WDR33|YEATS4
Human Viral_Chetaille09_666genes (19096012-TableS5)	4	CCDC93|GNB1|INPP5A|SMPD4	7.094333979e-05	34	6.26636066371e-05	AGAP5|APBB3|APPL1|BEND5|CCNL1|CDK5RAP3|CDK11A|CLASRP|DYNC1H1|HDAC7|HNRNPU|HP1BP3|IDS|MAX|MGEA5|NDUFA5|OGT|PLA2G6|PTPN18|RBM25|REST|SEC31B|SHQ1|SIK3|SRSF5|SUCLG2|TSC1|USP4|VPS13D|ZBTB7A|ZBTB40|ZNF589|ZNF692|ZRSR2	58	7.92230729428e-05	ABCD3|ADI1|ARL5A|ATP2B1|BMS1|C1D|C2ORF49|C12ORF29|C21ORF33|CCND2|CCT2|CISD1|CSTF2T|FAM136A|FAM168B|FCF1|GCSH|GIGYF2|GTF2H5|HIBCH|HNRNPA0|HSPA13|IFT57|INTS13|KBTBD4|KRAS|LRPPRC|MAP3K7|MCFD2|MTX2|NDUFAF4|NET1|NOP2|PARG|PCMT1|PEX3|PLEKHA1|PLEKHA5|PTEN|PWP1|RAN|RECQL|RNF41|RNGTT|RPAP3|RRN3|SEPHS1|SEPT10|SHCBP1|SLC30A5|SMNDC1|SPTBN1|STAM|TAF15|TBK1|TFAM|TFCP2|UBA5
KEGG_SPLICEOSOME	1	HNRNPA1	0.000288753590799	11	0.000551932668321	ACIN1|CCDC12|HNRNPA3|HNRNPM|HNRNPU|RBM25|SNRNP70|SNRNP200|SRSF4|SRSF5|SRSF6	20	2.55745132765e-05	CDC40|DDX23|MAGOHB|NCBP2|PRPF18|PRPF40A|PRPF40B|RBM17|SF3B6|SMNDC1|SNRNP27|SNRPF|SNRPG|SRSF3|SRSF9|SRSF10|TRA2B|U2AF1|USP39|WBP11
LASTOWSKA_NEUROBLASTOMA_COPY_NUMBER_DN	3	EPB41|GNB1|INPP5A	0.000184321608779	101	5.17903146791e-36	AGO4|APEH|ARHGEF10L|ARID1A|ARIH2|ASAP3|ATG16L2|ATXN7|BAP1|BEND5|BTAF1|CAMK2G|CBL|CCDC12|CCDC66|CCDC84|CCNL2|CLCN6|CLSTN1|CNOT10|CROCCP2|DCAF1|DHX30|ECE1|ECHS1|EFCAB14|EIF4G3|ELP6|EXOSC10|FAM76A|FRYL|GOLGA4|HK1|HP1BP3|HYAL2|KIAA1143|KPNA6|LARS2|LIMD1|LINC01783|MKNK1|MSANTD2|MTF1|MTFR1L|MTG1|NDST2|NDUFAF3|NEK4|NME6|NOL9|OGG1|OXSR1|PBRM1|PER3|PHACTR4|PPP2R2D|PRDM2|PUM1|QRICH1|RBM6|RBM15B|RERE|RHOA|RSRP1|RUFY2|S100PBP|SCAP|SEC22C|SEC24C|SETD2|SFPQ|SHISA5|SIK3|SLC25A34|SMARCC1|SPEN|SPRN|SRRM1|SRSF4|SS18L2|SZT2|TADA3|TBC1D5|TBRG1|TEX264|TKT|TMA7|TMEM115|TP73-AS1|TUBGCP2|TUSC2|UBR4|USP4|USP48|VPS13D|WDR6|ZNF436|ZNF518A|ZNF589|ZNF621|ZSWIM8	71	0.000368643217559	ABRAXAS2|AFDN|ANAPC16|AP3M1|ASCC1|ATAD1|ATE1|BMPR1A|BORCS7|BUB3|C10ORF88|CACUL1|CAPN7|CEP104|CHCHD1|CTBP2|CUEDC2|CUTC|CWF19L1|DDX21|DNAJC9|EDRF1|EEF1AKMT2|EXOC6|FANCD2|FBXL15|FRAT1|FRAT2|GHITM|GLUD1|GPAM|HIF1AN|HNRNPH3|HNRNPR|KIF1BP|KIF11|KIF15|MARCH5|MINPP1|MKI67|MRPL43|MRPS16|MSANTD4|NHLRC2|OAT|PAK1|PCBD1|PCGF6|PLEKHA1|PNRC2|POLR3A|PRDX3|PTEN|PTP4A2|R3HCC1L|RPP30|RSF1|SEC23IP|SHOC2|STAMBPL1|TAF5|TBC1D12|TMEM201|TRUB1|UBE2E1|UBE4B|VAMP3|VPS26A|VTI1A|WAPL|ZMYM6
MIPS_SPLICEOSOME	0		9.07554991279e-05	14	0.000174689766192	ACIN1|CIRBP|DDX17|RBM25|RBM39|SF1|SNRNP70|SNRNP200|SPEN|SRRM1|SRSF4|SRSF5|SRSF6|THOC7	24	6.82123206378e-06	CDC40|DDX23|DHX9|IGF2BP3|NCBP2|NUDT21|PPM1G|PRPF4B|PRPF18|PRPF40A|RBM17|SF3B6|SMNDC1|SNRNP27|SNRPF|SNRPG|SRSF3|SRSF9|THOC6|TRA2B|U2AF1|USP39|WBP11|WTAP
MODULE_183	1	HNRNPA1	0.000132000953725	8	0.000264000198397	DDX17|HNRNPDL|HNRNPU|RBM4|RBM5|SFPQ|SRSF6|ZNF638	19	1.7090525417e-09	CSTF3|DDX1|DDX23|DUSP11|HNRNPA0|HNRNPF|HNRNPR|IGF2BP3|PCBP2|PRPF4B|SART3|SNRPF|SNRPG|SRSF3|SRSF9|SRSF10|SSB|TRA2B|U2AF1
MORF_CDC16	2	ANAPC5|GNB1	0.000334183929662	8	0.000119887539802	ARIH2|NSUN5P2|SLC35E2|SMARCC1|SRRM1|TARDBP|USP24|ZFC3H1	11	0.000548480319522	HNRNPR|IMMT|LRPPRC|MDC1|MPHOSPH9|NPM3|PDIA6|PPP1CC|PRPF40A|VDAC2|XRCC5
MORF_PAPSS1	2	ANAPC5|GNB1	0.000197274709045	9	0.000394338117807	ARF4|CLSTN1|EFCAB14|PDHB|SEC24C|SMARCC2|SNRNP200|SRRM1|ZNF638	20	2.1130028277e-07	ACTR3|ANXA7|CS|EPRS|G3BP2|GPN1|HADHA|HADHB|HDAC2|LRPPRC|MDH1|SERP1|SMNDC1|STARD7|TIAL1|VAMP3|VDAC2|VPS26A|XRCC5|YWHAQ
MORF_TERF1	2	ANAPC5|GNB1	0.000105876241517	7	0.000206334796229	ARIH2|HNRNPU|PUM1|RBM6|SMARCC2|SNRNP200|SRRM1	13	5.41768680439e-06	ACP1|CS|EPRS|HNRNPR|LRPPRC|PTP4A2|SERP1|SMNDC1|STARD7|TIAL1|U2AF1|XRCC5|YWHAQ
Methyltransferase	0		0.000585532589524	15	0.000724545519136	HEMK1|KMT2A|KMT2D|KMT5B|METTL3|METTL17|NSUN5|NSUN5P1|NSUN5P2|NSUN6|PRDM2|SETD1B|SETD2|SETD4|TARBP1	24	0.000446519659912	ARMT1|BCDIN3D|COQ3|COQ5|EEF1AKMT2|EMG1|KMT5A|METTL1|METTL5|METTL8|METTL21A|N6AMT1|NOP2|PCMT1|PRDM4|PRDM15|PRMT2|SUV39H2|TFB1M|THUMPD2|TRMT2B|TRMT11|TRMT61B|TYMS
NFMUE1_Q6	2	HNRNPA1|RBM19	1.48071794202e-06	22	1.26928921346e-06	ACTR8|APBB3|CLK1|CLSTN1|DDX6|DYNC1H1|FAM160A2|JADE2|KIAA1143|NDST2|POU2F1|RBM4|RBM5|RBM15B|REST|SF1|SFPQ|SRRM1|TSC1|USP48|WASL|ZBED5	33	1.69214667057e-06	ADK|ARF1|ATF1|C2CD5|CCAR1|CSTF2T|E2F6|EIF3A|EIF4G2|EXOC6|GIGYF2|GNL3L|HNRNPH3|KIF15|MYNN|NFYA|NUS1|PCNT|PPP1CC|PPRC1|RAB1A|RIF1|SERBP1|SMC3|SMC4|SNRPF|SUV39H2|TMEM80|TRA2B|UBE4B|VDAC2|WDR33|ZFP91
RCGCANGCGY_NRF1_Q6	4	CCDC93|HNRNPA1|SMPD4|SON	0.000235019327272	44	0.000470037058254	ABHD5|ABHD14A|ABHD14B|ACIN1|AGFG2|AKAP8|AP1G2|APBB3|ARF4|CCDC12|CIRBP|CYB561D2|DENND6A|ELP6|GOLGA4|HNRNPDL|HNRNPL|LENG8|LRCH3|MAX|MGEA5|MKNK1|NDUFA5|NPRL2|PARP6|PHF1|POU2F1|RHOA|RNF123|RRP9|SEC24C|SF1|SMARCD3|SMG6|SNRNP70|SRRM1|SUGP2|TBC1D5|TCTA|TEX264|TMEM115|UQCRC1|ZNF638|ZNF692	99	1.59628984374e-09	ABHD10|ABI1|ANAPC16|ARRDC3|BCCIP|BCDIN3D|C12ORF65|C16ORF72|C21ORF33|CACUL1|CAPN7|CBR1|CCAR1|CENPO|CHMP2B|CNOT9|COQ3|COX7A2L|CPSF3|CRIPT|CRY1|DCTN5|DHX9|DPY30|DUSP6|DYNLT1|EIF3A|EIF5B|FAM98A|FASTKD2|FBXO5|GART|GEN1|GMNN|GPATCH11|GTF3C2|HMMR|HSDL1|HSPD1|HSPE1|IWS1|KPNA1|MCRS1|MFSD9|MITD1|MORC3|MRPL30|MRPS9|NAA25|NCAPH|NFYA|NR2C1|NUP107|PACRG|PALB2|PCGF6|PCNT|PDCL3|PLEKHA1|PPP1R12A|PPP2CA|PREB|RAB3IP|RAB10|RAB18|RAB35|RTKN2|RWDD1|SART3|SELENOI|SELENOT|SENP1|SERP1|SHMT2|SLC25A3|SMC4|SMC6|SPRY4|SRSF9|TBC1D15|TDG|TIAL1|TIGAR|TMEM69|TMTC2|TRMT11|TSEN2|TTLL4|TUBA1B|TXNDC9|UROS|UXS1|WAC|WDR12|YEATS4|ZC3H8|ZFP91|ZMYM6|ZNF322
REACTOME_MRNA_PROCESSING	1	HNRNPA1	7.85849876503e-05	14	0.000155940433977	CPSF7|HNRNPA3|HNRNPL|HNRNPM|HNRNPU|METTL3|NXF1|RBM5|SNRNP70|SNRNP200|SRRM1|SRSF4|SRSF5|SRSF6	26	1.22954132364e-06	AAAS|CCAR1|CDC40|CPSF3|CSTF3|DDX23|DHX9|ERCC3|HNRNPA0|HNRNPF|HNRNPR|NCBP2|NUDT21|NUP35|NUP37|NUP43|NUP107|PCBP2|POLR2D|RNGTT|SF3B6|SNRPF|SNRPG|SRSF3|SRSF9|U2AF1
REACTOME_MRNA_SPLICING	1	HNRNPA1	2.16590283609e-05	12	3.52711487692e-05	CPSF7|HNRNPA3|HNRNPL|HNRNPM|HNRNPU|RBM5|SNRNP70|SNRNP200|SRRM1|SRSF4|SRSF5|SRSF6	19	8.04690795267e-06	CCAR1|CDC40|CPSF3|CSTF3|DDX23|DHX9|HNRNPA0|HNRNPF|HNRNPR|NCBP2|NUDT21|PCBP2|POLR2D|SF3B6|SNRPF|SNRPG|SRSF3|SRSF9|U2AF1
REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA	1	HNRNPA1	1.69176747927e-05	14	3.28276231028e-05	CPSF7|HNRNPA3|HNRNPL|HNRNPM|HNRNPU|METTL3|NXF1|RBM5|SNRNP70|SNRNP200|SRRM1|SRSF4|SRSF5|SRSF6	24	1.00772648251e-06	AAAS|CCAR1|CDC40|CPSF3|CSTF3|DDX23|DHX9|HNRNPA0|HNRNPF|HNRNPR|NCBP2|NUDT21|NUP35|NUP37|NUP43|NUP107|PCBP2|POLR2D|SF3B6|SNRPF|SNRPG|SRSF3|SRSF9|U2AF1
RNA processing [GoID:GO:0006396; evidenceTypes:EXP|IBA|IC|IDA|IEA|IGI|IMP|ISS|NAS|TAS]	2	HNRNPA1|SON	3.4849594446e-08	58	6.96991888915e-08	ACIN1|AGO4|AKAP8L|AKAP17A|CCNL1|CDK11A|CELF6|CLASRP|CLK1|CLK4|CPSF7|DDX17|DHX30|ELP6|EXOSC7|EXOSC10|HNRNPA3|HNRNPL|HNRNPM|HNRNPU|METTL3|NOL9|NSUN5|NSUN5P1|NSUN5P2|NSUN6|PDE12|PPP4R2|PUM1|RBBP6|RBM4|RBM5|RBM6|RBM15B|RBM25|RBM39|RRP9|SAFB2|SF1|SFPQ|SFSWAP|SHQ1|SNRNP70|SNRNP200|SPEN|SRRM1|SRSF4|SRSF5|SRSF6|SUGP2|TARBP1|TARDBP|THOC7|USP4|YTHDC1|ZFC3H1|ZNF638|ZRSR2	124	5.37074032422e-19	ADAT1|ADAT2|ARL6IP4|BCDIN3D|BMS1|C1D|C2ORF49|CCAR1|CCNB1|CCNT1|CDC40|CDKAL1|CPSF3|CSTF2T|CSTF3|CTR9|DDX1|DDX21|DDX23|DDX47|DDX51|DDX54|DHX9|DHX37|DUSP11|DYRK1A|EMG1|ERCC3|EXOSC1|FCF1|GEMIN6|GTF2H5|GTPBP4|HELB|HNRNPA0|HNRNPF|HNRNPH3|HNRNPLL|HNRNPR|IMP4|IWS1|KRR1|LTV1|MAGOHB|MDN1|METTL1|MPHOSPH10|MRPS9|MTO1|MTPAP|NCBP2|NOC4L|NOLC1|NOP2|NOP58|NPM3|NUDT21|OSGEPL1|PA2G4|PCBP2|PDCD11|PNO1|PNPT1|POLR2D|POP5|PPIG|PPP2CA|PRKRA|PRPF4B|PRPF18|PRPF40A|PRPF40B|PUS1|PUS7L|PWP2|RBM17|RNGTT|RPF2|RPL22|RPLP0|RPP30|RPP38|RPS26|RRP1|RRP1B|SARNP|SART3|SCAF11|SF3B6|SMNDC1|SNRNP27|SNRPF|SNRPG|SRSF3|SRSF9|SRSF10|SSB|STRAP|SUPV3L1|SYNCRIP|TARBP2|TFB1M|THOC6|THUMPD1|THUMPD2|TMBIM6|TPRKB|TRA2B|TRMT2B|TRMT11|TRMT61B|TRUB1|TSEN2|TSN|TYW5|U2AF1|USP39|WBP11|WDR12|WDR33|WDR43|WDR75|WTAP|YBEY
RNA splicing [GoID:GO:0008380; evidenceTypes:IBA|IC|IDA|IEA|IGI|IMP|ISS|NAS|TAS]	2	HNRNPA1|SON	6.49190539764e-09	37	1.60645964458e-09	ACIN1|AKAP8L|AKAP17A|CELF6|CLASRP|CLK1|CLK4|CPSF7|DDX17|HNRNPA3|HNRNPL|HNRNPM|HNRNPU|METTL3|PPP4R2|RBM4|RBM5|RBM15B|RBM25|RBM39|SF1|SFPQ|SFSWAP|SNRNP70|SNRNP200|SPEN|SRRM1|SRSF4|SRSF5|SRSF6|SUGP2|TARDBP|THOC7|USP4|YTHDC1|ZNF638|ZRSR2	55	1.13773511507e-08	ARL6IP4|C2ORF49|CCAR1|CDC40|CPSF3|CSTF2T|CSTF3|DDX1|DDX23|DDX47|DHX9|DYRK1A|GEMIN6|HNRNPA0|HNRNPF|HNRNPH3|HNRNPLL|HNRNPR|IWS1|MAGOHB|MPHOSPH10|NCBP2|NUDT21|PCBP2|POLR2D|PPIG|PPP2CA|PRPF4B|PRPF18|PRPF40A|PRPF40B|RBM17|RPS26|RRP1B|SART3|SCAF11|SF3B6|SMNDC1|SNRNP27|SNRPF|SNRPG|SRSF3|SRSF9|SRSF10|STRAP|SYNCRIP|THOC6|TMBIM6|TRA2B|TSEN2|U2AF1|USP39|WBP11|WDR33|WTAP
RNA splicing, via transesterification reactions [GoID:GO:0000375; evidenceTypes:IBA|IC|IDA|IEA|IGI|IMP|ISS|NAS|TAS]	2	HNRNPA1|SON	2.05788797949e-06	25	3.93256262682e-06	CELF6|CPSF7|DDX17|HNRNPA3|HNRNPL|HNRNPM|HNRNPU|METTL3|RBM4|RBM5|RBM15B|RBM25|SF1|SFPQ|SFSWAP|SNRNP70|SNRNP200|SPEN|SRRM1|SRSF4|SRSF5|SRSF6|USP4|YTHDC1|ZRSR2	43	1.83213332168e-07	CCAR1|CDC40|CPSF3|CSTF2T|CSTF3|DDX1|DDX23|DHX9|DYRK1A|GEMIN6|HNRNPA0|HNRNPF|HNRNPH3|HNRNPR|MAGOHB|MPHOSPH10|NCBP2|NUDT21|PCBP2|POLR2D|PRPF4B|PRPF18|PRPF40A|PRPF40B|RBM17|SART3|SCAF11|SF3B6|SMNDC1|SNRNP27|SNRPF|SNRPG|SRSF3|SRSF9|SRSF10|STRAP|SYNCRIP|TRA2B|U2AF1|USP39|WBP11|WDR33|WTAP
RNA splicing, via transesterification reactions with bulged adenosine as nucleophile [GoID:GO:0000377; evidenceTypes:IBA|IC|IDA|IEA|IGI|IMP|ISS|NAS|TAS]	2	HNRNPA1|SON	1.81011933902e-06	25	3.26136013619e-06	CELF6|CPSF7|DDX17|HNRNPA3|HNRNPL|HNRNPM|HNRNPU|METTL3|RBM4|RBM5|RBM15B|RBM25|SF1|SFPQ|SFSWAP|SNRNP70|SNRNP200|SPEN|SRRM1|SRSF4|SRSF5|SRSF6|USP4|YTHDC1|ZRSR2	42	3.58878541843e-07	CCAR1|CDC40|CPSF3|CSTF2T|CSTF3|DDX1|DDX23|DHX9|DYRK1A|GEMIN6|HNRNPA0|HNRNPF|HNRNPH3|HNRNPR|MAGOHB|NCBP2|NUDT21|PCBP2|POLR2D|PRPF4B|PRPF18|PRPF40A|PRPF40B|RBM17|SART3|SCAF11|SF3B6|SMNDC1|SNRNP27|SNRPF|SNRPG|SRSF3|SRSF9|SRSF10|STRAP|SYNCRIP|TRA2B|U2AF1|USP39|WBP11|WDR33|WTAP
RNA-binding	4	HNRNPA1|RBM19|SCAF4|SON	7.84175289449e-11	54	6.15850047773e-13	ACIN1|AGO4|AKAP17A|CAPRIN2|CELF6|CIRBP|CPSF7|DDX6|DDX17|DHX30|EDC3|EIF4G3|EXOSC7|EXOSC10|HNRNPA3|HNRNPDL|HNRNPL|HNRNPM|HNRNPU|METTL3|NANOS3|NOL9|NSUN5|NSUN5P1|NSUN5P2|NSUN6|NXF1|PUM1|RBM4|RBM5|RBM6|RBM15B|RBM25|RBM33|RBM39|RRP9|SAFB2|SETD1B|SF1|SFPQ|SFSWAP|SNRNP70|SPEN|SRRM1|SRSF4|SRSF5|SRSF6|TARBP1|TARDBP|THOC7|TNRC6A|YTHDC1|ZNF638|ZRSR2	79	1.56219207842e-10	C1D|CAPRIN1|CPSF3|CSTF2T|DDX1|DDX18|DDX21|DDX47|DDX51|DDX54|DDX55|DHFR|DHX9|DUSP11|EIF3A|EIF4B|EIF5A2|EMG1|EPRS|EXOSC1|FASTKD2|FXR1|G3BP2|HNRNPA0|HNRNPF|HNRNPH3|HNRNPLL|HNRNPR|IGF2BP3|KDM2B|KRR1|LARP4|LRPPRC|MAGOHB|METTL1|MORC3|MRPL18|MTPAP|NCBP2|NCL|NIFK|NOP2|NUDT5|NUDT21|PA2G4|PCBP2|PNO1|PNPT1|PPRC1|PRKRA|PTCD3|RAD51AP1|RBM17|RPL22|SARNP|SART3|SERBP1|SF3B6|SNRPF|SNRPG|SRSF3|SRSF9|SRSF10|SSB|SYNCRIP|TAF15|TARBP2|TFB1M|THOC6|THUMPD2|TIAL1|TRA2B|TRMT11|TSN|U2AF1|UNC50|XPOT|ZC3H8|ZFR
chromatin organization [GoID:GO:0006325; evidenceTypes:IBA|IDA|IEA|IGI|IMP|IPI|ISS|NAS|TAS]	0		8.15914932392e-05	48	1.54920069032e-06	ABRAXAS1|ACTR8|AKAP8|AKAP8L|ARID1A|ATXN7|BAP1|CBX6|CBX7|CHD8|DCAF1|DDB2|EP400|EYA3|HDAC6|HDAC7|HNRNPU|HP1BP3|HSF4|JADE2|KMT2A|KMT2D|KMT5B|MAP3K12|MUM1|NAA40|OGT|PBRM1|PHC1|PHF1|PHF2|PHF21A|PRDM2|PRKCD|RERE|REST|SETD1B|SETD2|SFMBT1|SFPQ|SIN3B|SMARCC1|SMARCC2|SMARCD3|TADA3|TSPYL2|UIMC1|WDR82	70	0.000161633785788	ACTR6|AEBP2|ARID2|ASF1A|ATAD2B|ATG5|AURKB|BEND3|BRWD1|CCNB1|CDK1|CDK2|CENPA|CENPH|CENPK|CENPO|CENPW|CHAF1A|CHAF1B|CTR9|DPY30|HASPIN|HAT1|HDAC2|HDAC4|HELLS|HIST1H4C|HIST1H4G|HJURP|HLCS|HLTF|HMGN1|HMGN5|ING5|IWS1|KANSL2|KDM2B|KMT5A|MAP3K7|MAPK8|MCRS1|MIS18A|MKI67|MTA3|NAA50|NAP1L1|NUDT5|PCGF5|PCGF6|PHF19|PRDM4|PRKAA1|PRMT2|PSME4|PWP1|RIF1|RSF1|SART3|SUPT3H|SUPT7L|SUPV3L1|SUV39H2|TAF5|TDG|TET3|UBE2E1|UBE2N|USP16|WAC|YEATS4
mRNA metabolic process [GoID:GO:0016071; evidenceTypes:IBA|IC|IDA|IEA|IGI|IMP|ISS|NAS|TAS]	2	HNRNPA1|SON	1.63879450735e-08	53	2.98869235613e-08	ACIN1|AGO4|AKAP8L|AKAP17A|CDK11A|CELF6|CIRBP|CLASRP|CNOT10|CPSF7|DCP1A|DDX6|DDX17|EDC3|EXOSC7|EXOSC10|HNRNPA3|HNRNPL|HNRNPM|HNRNPU|METTL3|NANOS3|PDE12|PPP4R2|PRKCD|PSMD6|PUM1|RBBP6|RBM4|RBM5|RBM15B|RBM25|RBM39|SAFB2|SF1|SFPQ|SFSWAP|SMG6|SNRNP70|SNRNP200|SPEN|SRRM1|SRSF4|SRSF5|SRSF6|SUGP2|TARDBP|THOC7|TNKS1BP1|USP4|YTHDC1|ZHX2|ZRSR2	87	2.88896658579e-09	ARL6IP4|CCAR1|CCNB1|CCNT1|CDC40|CNOT2|CNOT9|CPSF3|CSTF2T|CSTF3|CTR9|DDX1|DDX23|DDX47|DHX9|DYRK1A|EIF4B|ERCC3|EXOSC1|FASTKD1|GEMIN6|GIGYF2|GTF2H5|HBS1L|HNRNPA0|HNRNPF|HNRNPH3|HNRNPLL|HNRNPR|IGF2BP3|IWS1|MAGOHB|MAPK14|MTPAP|NCBP2|NUDT21|PCBP2|PDCD11|PNPT1|PNRC2|POLR2D|PPP2CA|PRPF4B|PRPF18|PRPF40A|PRPF40B|PSMB1|PSMD1|PSMD9|PSMD14|PSME4|PUS1|RBM17|RNGTT|RPL22|RPLP0|RPS26|RRP1B|SARNP|SART3|SCAF11|SERBP1|SF3B6|SMNDC1|SNRNP27|SNRPF|SNRPG|SRSF3|SRSF9|SRSF10|SSB|STRAP|SUPV3L1|SYNCRIP|TFCP2|THOC6|TMBIM6|TRA2B|TRMT61B|TRUB1|TSEN2|U2AF1|USP39|WBP11|WDR33|WTAP|YBX3
mRNA processing	2	HNRNPA1|SON	2.99043185671e-08	31	8.12711982661e-09	ACIN1|AKAP8L|AKAP17A|CELF6|CLASRP|CPSF7|DDX17|HNRNPA3|HNRNPM|HNRNPU|PDE12|PPP4R2|RBM4|RBM5|RBM15B|RBM25|RBM39|SF1|SFPQ|SFSWAP|SNRNP70|SNRNP200|SRRM1|SRSF4|SRSF5|SRSF6|SUGP2|TARDBP|THOC7|YTHDC1|ZRSR2	46	5.16815173075e-08	ARL6IP4|CDC40|CPSF3|CSTF2T|CSTF3|DDX1|DDX23|DDX47|DHX9|GEMIN6|HNRNPF|HNRNPH3|HNRNPR|IWS1|MAGOHB|MTPAP|NCBP2|NUDT21|PNPT1|PRPF4B|PRPF18|PRPF40A|PRPF40B|RBM17|RNGTT|RRP1B|SART3|SCAF11|SF3B6|SMNDC1|SNRNP27|SNRPF|SNRPG|SRSF3|SRSF9|SRSF10|STRAP|SYNCRIP|THOC6|TRA2B|TSEN2|U2AF1|USP39|WBP11|WDR33|WTAP
mRNA processing [GoID:GO:0006397; evidenceTypes:IBA|IC|IDA|IEA|IGI|IMP|ISS|NAS|TAS]	2	HNRNPA1|SON	2.64738059238e-08	38	2.38539401266e-08	ACIN1|AKAP8L|AKAP17A|CDK11A|CELF6|CLASRP|CPSF7|DDX17|HNRNPA3|HNRNPL|HNRNPM|HNRNPU|METTL3|PDE12|PPP4R2|RBBP6|RBM4|RBM5|RBM15B|RBM25|RBM39|SAFB2|SF1|SFPQ|SFSWAP|SNRNP70|SNRNP200|SPEN|SRRM1|SRSF4|SRSF5|SRSF6|SUGP2|TARDBP|THOC7|USP4|YTHDC1|ZRSR2	60	2.90936717209e-08	ARL6IP4|CCAR1|CCNB1|CCNT1|CDC40|CPSF3|CSTF2T|CSTF3|CTR9|DDX1|DDX23|DDX47|DHX9|DYRK1A|ERCC3|GEMIN6|GTF2H5|HNRNPA0|HNRNPF|HNRNPH3|HNRNPLL|HNRNPR|IWS1|MAGOHB|MTPAP|NCBP2|NUDT21|PCBP2|PDCD11|PNPT1|POLR2D|PRPF4B|PRPF18|PRPF40A|PRPF40B|RBM17|RNGTT|RRP1B|SARNP|SART3|SCAF11|SF3B6|SMNDC1|SNRNP27|SNRPF|SNRPG|SRSF3|SRSF9|SRSF10|STRAP|SYNCRIP|THOC6|TMBIM6|TRA2B|TSEN2|U2AF1|USP39|WBP11|WDR33|WTAP
mRNA splicing	2	HNRNPA1|SON	1.04924684207e-06	27	3.67665507652e-09	ACIN1|AKAP8L|AKAP17A|CLASRP|DDX17|HNRNPA3|HNRNPM|HNRNPU|PPP4R2|RBM4|RBM5|RBM15B|RBM25|RBM39|SF1|SFPQ|SFSWAP|SNRNP200|SRRM1|SRSF4|SRSF5|SRSF6|SUGP2|TARDBP|THOC7|YTHDC1|ZRSR2	35	2.09481702906e-06	ARL6IP4|CDC40|DDX23|DDX47|DHX9|GEMIN6|HNRNPF|HNRNPR|IWS1|MAGOHB|NCBP2|PRPF4B|PRPF18|PRPF40A|PRPF40B|RBM17|RRP1B|SART3|SCAF11|SF3B6|SMNDC1|SNRNP27|SNRPF|SNRPG|SRSF3|SRSF9|SRSF10|STRAP|SYNCRIP|THOC6|TRA2B|U2AF1|USP39|WBP11|WTAP
mRNA splicing, via spliceosome [GoID:GO:0000398; evidenceTypes:IBA|IC|IDA|IEA|IGI|IMP|ISS|NAS|TAS]	2	HNRNPA1|SON	1.81011933902e-06	25	3.26136013619e-06	CELF6|CPSF7|DDX17|HNRNPA3|HNRNPL|HNRNPM|HNRNPU|METTL3|RBM4|RBM5|RBM15B|RBM25|SF1|SFPQ|SFSWAP|SNRNP70|SNRNP200|SPEN|SRRM1|SRSF4|SRSF5|SRSF6|USP4|YTHDC1|ZRSR2	42	3.58878541843e-07	CCAR1|CDC40|CPSF3|CSTF2T|CSTF3|DDX1|DDX23|DHX9|DYRK1A|GEMIN6|HNRNPA0|HNRNPF|HNRNPH3|HNRNPR|MAGOHB|NCBP2|NUDT21|PCBP2|POLR2D|PRPF4B|PRPF18|PRPF40A|PRPF40B|RBM17|SART3|SCAF11|SF3B6|SMNDC1|SNRNP27|SNRPF|SNRPG|SRSF3|SRSF9|SRSF10|STRAP|SYNCRIP|TRA2B|U2AF1|USP39|WBP11|WDR33|WTAP
methyltransferase activity [GoID:GO:0008168; evidenceTypes:EXP|IBA|IDA|IEA|IMP|ISS|TAS]	0		0.000370512231434	17	0.000439419983261	AMT|HEMK1|KMT2A|KMT2D|KMT5B|METTL3|METTL17|NSUN5|NSUN5P1|NSUN5P2|NSUN6|PRDM2|SETD1B|SETD2|SETD4|TARBP1|WDR82	27	0.000301604479607	ARMT1|BCDIN3D|COQ3|COQ5|DPY30|EEF1AKMT2|EMG1|FAM98A|GCSH|KMT5A|METTL1|METTL5|METTL8|METTL21A|N6AMT1|NOP2|PCMT1|PRDM4|PRDM15|PRMT2|SUV39H2|TFB1M|THUMPD2|TRMT2B|TRMT11|TRMT61B|TYMS
nuclear body [GoID:GO:0016604; evidenceTypes:IBA|IDA|IEA|IMP|ISS|TAS]	1	SON	8.99051496419e-05	49	2.22049644866e-07	ABRAXAS1|ACIN1|AGO4|AKAP8L|AKAP17A|CCNL1|CCNL2|CEP164|CIART|CRY2|DDX17|EP400|FNBP4|HNRNPM|HNRNPU|HP1BP3|HSF4|IKZF4|MAU2|MAX|METTL3|NXF1|OGG1|PHF7|PUM1|RBM4|RBM25|RBM39|S100PBP|SAFB2|SETBP1|SETD1B|SF1|SFPQ|SNRNP70|SRRM1|SRSF4|SRSF5|SRSF6|SUGP2|THOC7|TKT|TLE2|TP53BP1|UIMC1|YLPM1|YTHDC1|ZNF621|ZNF638	68	0.000179588249639	AFDN|ARL6IP4|CAPN7|CASP8AP2|CDC25C|CDK2|CDYL|CTR9|DAZAP2|DDX1|DHX9|DUSP11|DYRK1A|FANCD2|GADD45A|GEMIN6|KIF18B|MAPK14|MDC1|MKI67|MORC3|NOC3L|NOLC1|NOP58|NR2C1|NRIP1|NSMCE4A|NUDT21|ORC3|PCNP|POLR2D|PPIG|PPP1CC|PRDM15|PRKAA1|PRPF4B|PRPF18|PRPF40A|PRPF40B|PSME4|PTEN|RIF1|RNF34|RREB1|SAP130|SARNP|SART3|SCAF11|SENP2|SGO2|SIM2|SMC4|SMC6|SMNDC1|SRSF3|SRSF10|SUMO1|SUMO3|TARBP2|TDG|THOC6|U2AF1|WAC|WTAP|YARS2|YME1L1|ZC3H8|ZWINT
regulation of mRNA metabolic process [GoID:GO:1903311; evidenceTypes:IBA|IC|IDA|IEA|IGI|IMP|ISS|NAS|TAS]	2	HNRNPA1|SON	0.000292295521949	25	1.22560595798e-07	CDK11A|CELF6|CIRBP|DCP1A|DDX17|EXOSC7|HNRNPL|HNRNPU|METTL3|NANOS3|PDE12|PRKCD|PSMD6|PUM1|RBM4|RBM5|RBM15B|RBM25|SAFB2|SFSWAP|SNRNP70|SRSF4|SRSF6|TARDBP|YTHDC1	29	0.000584468483303	CCNB1|CCNT1|CTR9|DHX9|DYRK1A|EXOSC1|FASTKD1|GIGYF2|HNRNPA0|HNRNPR|IGF2BP3|IWS1|MAPK14|NCBP2|PNPT1|PSMB1|PSMD1|PSMD9|PSMD14|PSME4|SERBP1|SRSF3|SRSF9|SRSF10|SYNCRIP|TMBIM6|TRA2B|WTAP|YBX3
ribonucleoprotein complex assembly [GoID:GO:0022618; evidenceTypes:IBA|IC|IDA|IEA|IMP|ISS|NAS|TAS]	0		0.00014176792634	17	0.00025714978581	AGO4|CIRBP|DDX6|DHX30|DYNC1H1|EDC3|LIMD1|RBM5|SF1|SFSWAP|SHQ1|SNRNP200|SRSF5|SRSF6|USP4|YTHDC1|ZRSR2	28	2.63860668694e-05	BMS1|CNOT2|DDX1|DDX23|DENR|DHX9|EIF3A|EIF4B|FASTKD2|G3BP2|GEMIN6|HSP90AB1|MDN1|NOP2|POLR2D|PRPF18|PTGES3|PWP2|RPF2|SART3|SCAF11|SNRPF|SNRPG|SRSF9|SRSF10|STRAP|TARBP2|USP39
ribonucleoprotein complex biogenesis [GoID:GO:0022613; evidenceTypes:EXP|IBA|IC|IDA|IEA|IMP|ISS|NAS|TAS]	0		0.000146207599999	29	0.000292415199994	AGO4|CIRBP|DDX6|DDX17|DHX30|DYNC1H1|EDC3|EXOSC7|EXOSC10|LIMD1|MTG1|NOL9|NSUN5|NSUN5P1|NSUN5P2|RBM5|RRP9|SETD4|SF1|SFSWAP|SHQ1|SNRNP200|SRSF5|SRSF6|TARBP1|TSC1|USP4|YTHDC1|ZRSR2	72	3.43202717795e-15	BMS1|C1D|CNOT2|DDX1|DDX21|DDX23|DDX47|DDX51|DENR|DHX9|DHX37|EIF3A|EIF4B|EMG1|EXOSC1|FASTKD2|FCF1|G3BP2|GEMIN6|GNL3L|GTF2H5|GTPBP4|HEATR3|HSP90AB1|IMP4|KRR1|LTV1|MDN1|MPHOSPH10|MRPS9|NMD3|NOA1|NOC4L|NOLC1|NOP2|NOP58|NPM3|PA2G4|PDCD11|PNO1|POLR2D|PRPF18|PTEN|PTGES3|PWP2|RAN|RPF2|RPL22|RPLP0|RPP30|RPP38|RPS26|RRN3|RRP1|RRP1B|SART3|SCAF11|SNRPF|SNRPG|SRSF9|SRSF10|STRAP|TARBP2|TFB1M|THUMPD1|TRMT61B|USP39|WBP11|WDR12|WDR43|WDR75|YBEY
ribonucleoprotein complex subunit organization [GoID:GO:0071826; evidenceTypes:IBA|IC|IDA|IEA|IMP|ISS|NAS|TAS]	0		9.53609154796e-05	18	0.000178677047352	AGO4|CIRBP|DDX6|DHX30|DYNC1H1|EDC3|KLC1|LIMD1|RBM5|SF1|SFSWAP|SHQ1|SNRNP200|SRSF5|SRSF6|USP4|YTHDC1|ZRSR2	30	1.20447836073e-05	BMS1|CNOT2|DDX1|DDX23|DENR|DHX9|EIF3A|EIF4B|FASTKD2|G3BP2|GEMIN6|GFM2|HSP90AB1|MDN1|MTIF2|NOP2|POLR2D|PRPF18|PTGES3|PWP2|RPF2|SART3|SCAF11|SNRPF|SNRPG|SRSF9|SRSF10|STRAP|TARBP2|USP39
transferase activity, transferring one-carbon groups [GoID:GO:0016741; evidenceTypes:EXP|IBA|IDA|IEA|IMP|ISS|TAS]	0		0.000412234715806	17	0.000804930483121	AMT|HEMK1|KMT2A|KMT2D|KMT5B|METTL3|METTL17|NSUN5|NSUN5P1|NSUN5P2|NSUN6|PRDM2|SETD1B|SETD2|SETD4|TARBP1|WDR82	31	1.95389484918e-05	ARMT1|ATIC|BCDIN3D|CAD|COQ3|COQ5|DPY30|EEF1AKMT2|EMG1|FAM98A|GART|GCSH|KMT5A|METTL1|METTL5|METTL8|METTL21A|N6AMT1|NOP2|PCMT1|PRDM4|PRDM15|PRMT2|SHMT2|SUV39H2|TFB1M|THUMPD2|TRMT2B|TRMT11|TRMT61B|TYMS
